S

Structural Biology

BioInterface is a Biopython based package that extracts Protein-DNA interfaces in a PDB structures.

PDBNucleicAcids is a Biopython based package that constructs and represent all nucleic acids in a PDB structure, with a special focus on base-pair representation.

Haruspex is a Convolutional Neural Network capable of recognizing and predicting secondary structure elements and nucleotides in Cryo-EM reconstruction density.